exPlants

Dear SIVB Plant Biotechnology Section Members:

In late October, I will be co-convening a workshop on Developing a Strategy for the Ex Situ Conservation of Threatened Exceptional Species. We are defining “exceptional species” as those that cannot be conserved through conventional seed banking technologies. For these species, in vitro methods will play an important role, both in propagating materials for restoration, and providing tissues and methods of recovery for cryopreservation protocols.

There are two important challenges to developing this strategy that are relevant to PBS members. 1) Whereas we have standard in vitro protocols that work well for propagating and cryopreserving tissues for many species, we know that standard protocols do not work for every species. Scientific and technological advances in applying protocols more broadly are needed in order to deal with the 5,000 – 10,000 species (at least) that fall into this category. 2) Because of the additional labor and resources needed, the costs for dealing with these species will be greater than traditional seed banking.

Any thoughts on the following 3 questions would be greatly appreciated, as they will provide input from you, as a group with direct expertise in in vitro methods.

  1. In your experience, what is the most difficult aspect (or aspects) of applying in vitro methods to a new species?
  2. In your opinion, what area(s) of research would be most important for meeting the challenge of applying in vitro methods to new species?
  3. What kinds of collaborations might you see between industry, academia, government labs, non-profits, and others that might help make applying in vitro methods to endangered exceptional species more efficient and, thus, less costly?

Please send any thoughts, suggestions, or comments to me, Valerie Pence, at [email protected]. Please feel free to be creative and “think outside the box.”

Thank you!

Valerie Pence
Cincinnati Zoo and Botanical Garden


Dr. Suad Al-Mazrooei (Department of Biological Sciences, Faculty of Science, Kuwait University) received notification of grant funding from the Research sector in Kuwait University for his research project titled “Characterization of Stress Genes and Effects of Multiple Abiotic Stress on Gene Expression, Protein and Metabolite Profiles of the Xerophitic Desert Shrub, Haloxylon salicornicum in Kuwait”.


The Plant Research Division of the Center for Conservation and Research of Endangered Wildlife at the Cincinnati Zoo and Botanical Gardens has recently hired a post-doc, Dr. Dani Ballesteros, to work on the IMLS-funded project, Evaluating Two Decades of Seeds, Spores, and Tissues in CREW’s CryoBioBank: Cryostorage as a Tool for Ex Situ Conservation in Botanical Gardens . Dani will be working with Dr. Valerie Pence to study samples of in vitro tissues, as well as seeds and spores that will be removed from long-term liquid nitrogen storage during the course of the project. The oldest samples have been frozen for 25 years. The samples will be evaluated for survival and analyzed in terms of a variety of parameters, including the methods of storage, length of time in LN, position in the tank, etc. In addition, a Ph.D. student from the University of Cincinnati, Megan Philpott, has joined the project to analyze the samples for genetic changes during storage. It is anticipated that about 1000 samples will be removed from CREW’s “Frozen Garden” during the three years of the project.

sciNews2

The history of the first normal human cell strain, WI-38, that Dr. Leonard Hayflick developed in 1963 is featured in a recent news article in the journal Nature (498:422-426, June 22, 2013). Also, an interview with Dr. Hayflick is available at www.webofstories.com.


Uganda has faced many famines and currently is facing a book famine. One of our members, Dr. James A Radosevich, Ph.D. (University of Illinois at Chicago) has been working with health professionals in Uganda to bring books to the country. When he first went there three years ago he found libraries with shelves, but no books. With little or no access to the internet and no books, educators and students are very challenged to get learning material. Did you know that some children go from K-12, and never touch a book? In his efforts to help, Dr. Radosevich set up a project with Books For Africa (BFA). https://www.booksforafrica.org/donate/to-project.html?projectId=135

BFA collects, sorts, boxes, and pallets books from all over the USA. Your tax deductable contribution will help to put 22,000 books on the ground there to support several schools included a Medical School, School of Nursing, and a school for the deaf. If any of our members are interested in donating to this cause, the link above provides a direct way to do so. Anyone who is interested in going to Uganda to help can contact Dr. Radosevich at [email protected] .


Dr. Mahipal Sigh was promoted from Assistant Professor to Associate Professor of Animal Science at Fort Kent University (Fort Valley, GA). Dr. Singh also recently served on a USDA-NIFA panel on K-14 partnerships and recruitment/retention during Project Directors Meeting at Virginia Tech. Dr. Sing has also received a USDA-NIFA Capacity Building grant.


In August, Jeff Kwak will continue with his education in the Cancer Biology Ph.D. Program at the University of Colorado (Denver, CO).


Joshua Gasiorowski, Ph.D. has accepted the position of Assistant Professor in the Biomedical Sciences Program in the College of Health Sciences at Midwestern University (Downers Grove, IL). Prior to joining the faculty at Midwestern University, Joshua was a Postdoctoral Scholar in the Department of Surgery at the University of Chicago. Dr. Gasiorowski recently co-authored the article titled “Early responses of vascular endothelial cells to topographic cues” in American Journal of Physiology-Cell Physiology. Please use the following link to read the abstract for this publication: http://www.ncbi.nlm.nih.gov/pubmed/23703527. He also recently published the article titled “Biophysical cues and cell behavior: The big impact of little things” in Annual Reviews of Biomedical Engineering. Please use the following link to read the abstract for this publication: http://www.ncbi.nlm.nih.gov/pubmed/23862676.

The following Biotechnology training courses are being offered at the National Institutes of Health in Bethesda, MD. These Workshops are sponsored by the Foundation for Advanced Education in the Sciences. For more information on these workshops please visit www.biotrac.com.

 

 

October Workshops

Small Interfering RNA (siRNA) & Functional Genomics, September 30 – October 4, 2013
Vaccines: Development and Evaluation of Efficacy, October 7-11, 2013
Bioinformatic Analysis of Next Generation Sequencing Data, October 8-11, 2013
miRNA: Tools and Techniques for the Quantitative and Functional Analysis in Mammalian Cells, October 15 – 17, 2013
Protein Informatics, October 16 – 18, 2013
Stem Cell: Principles & Applications, October 21-25, 2013
iPSC II: Induced Human Pluripotent Stem Cells (hiPSC); Differentiation to Neural Lineages, October 28 – November 1, 2013

November Workshops

Protein-DNA Interactions: Gene Specific and Epigenetic Regulation of Expression of the Mammalian Genome, November 4-8, 2013
Super Resolution Microscopy: Principles and Methods, November 6-8, 2013
Flow Cytometry: Principles and Methods, November 12-15, 2013
Expression, Detection & Purification of Recombinant Proteins in Prokaryotic & Eukaryotic Cells, November 20-22, 2013

December Workshops

Epigenetics, December 11-13, 2013
Proteomics: Principles and Methods, December 9-13, 2013
Digital Imaging, December 11-13, 2013

January Workshops

Laser Capture Microdissection: Methods for Microgenomic Analysis, January 13-17, 2014
Immunofluorescence & Confocal Microscopy, January 21-24, 2014
Real Time and Quantitative PCR, January 27-31, 2014

February Workshops

Principles and Applications of DNA Microarrays, February 3-7, 2014
Genome Analysis and Mutation Detection, February 10-14, 2014
Vaccines: Development and Evaluation of Efficacy, February 18-21, 2014
Cellular Immunology: Principles and Methods, February 24-28, 2014

March Workshops

Stem Cell: Principles & Applications, March 3-7, 2014
iPSC II: Induced Human Pluripotent Stem Cells (hiPSC); Differentiation to Neural Lineages, March 10-14, 2014
Immunohistochemistry, March 19-21, 2014
Proteomics: Principles and Methods, March 24-28, 2014

April Workshops

Epigenetics, April 1-4, 2014
Nanotechnology in Medicine, April 9-11, 2014
Hybridization Techniques: Labeling, Detection & Applications, April 14-17, 2014
Cellular Immunology: Principles and Methods, April 21-25, 2014
miRNA: Tools and Technologies for the Quantitative and Functional Analysis in Mammalian Cells, April 28-30, 2014
Protein Informatics, April 29 – May 1, 2014

May Workshops

Flow Cytometry: Principles and Methods, May 6-9, 2014
Advanced Microarray Analysis and Pathway Integration, May 12-15, 2013
Mitochondrial Molecular Biology and Pathology Workshop, May 13-15, 2014
Animal and Human Cell Culture: Method and Applications, May 19-23, 2014

June Workshops

Recombinant DNA Methodology, June 2-6, 2014
Clinical Proteomics and Biomarker Discovery, June 16-20, 2014

July Workshops

PCR Methodology: Principles, Optimization and Applications, July 7-11, 2014
Bioinformatic Analysis of Next Generation Sequencing Data, July 8 – 11, 2014
Real Time and Quantitative PCR, July 14-18, 2014
Using TALENs for Gene Engineering, July 28-30, 2014

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